FASTQ2toFASTA help

Description

FASTA file preparation from FASTQ Illumina data for using with OligoZip as an input.

Input data

FASTQ file - file with first reads from pairs
FASTQ file - file with second reads from pairs
-phred encoding scheme (64 or 33)

 Phred quality table (Q -> p) (for -qsmall ):

  Phred+64:  @  A  B  C  D  E  F ...
  Phred+33:  !  "  #  $  %  &  ' ...
  Q-score :  0  1  2  3  4  5  6 ...

             Q ->  p
             ---------
             0 -> 1.0
             1 -> 0.79
             2 -> 0.63 + special symbol B (phred+64)
             3 -> 0.5
             4 -> 0.4
             5 -> 0.32
             6 -> 0.25
             ...

Output data

FASTA-file with reads.